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1

Current Protocols in Bioinformatics || Using AutoDock for Ligand-Receptor Docking

Baxevanis, Andreas D., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 1.42 MB

english, 2002

2

Current Protocols in Bioinformatics Volume 27 || Creating Databases for Biological Information: An Introduction

Baxevanis, Andreas D., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 761 KB

english, 2002

3

Current Protocols in Bioinformatics || Searching Online Mendelian Inheritance in Man (OMIM) for Information on Genetic Loci Involved in Human Disease

Baxevanis, Andreas D., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 476 KB

english, 2002

4

Current Protocols in Bioinformatics || Metabolomic Data Processing, Analysis, and Interpretation Using MetaboAnalyst

Baxevanis, Andreas D., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 2.53 MB

english, 2002

5

Current Protocols in Bioinformatics || Using QIIME to Analyze 16S rRNA Gene Sequences from Microbial Communities

Baxevanis, Andreas D., Davison, Daniel B., Page, Roderic D.M., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 732 KB

english, 2002

6

CRISPR/Cas9-mediated gene knockin in the hydroid Hydractinia symbiolongicarpus

Sanders, Steven M., Ma, Zhiwei, Hughes, Julia M., Riscoe, Brooke M., Gibson, Gregory A., Watson, Alan M., Flici, Hakima, Frank, Uri, Schnitzler, Christine E., Baxevanis, Andreas D., Nicotra, Matthew L

Journal:

Year:

2018

Language:

english

File:

PDF, 9.07 MB

english, 2018

7

Current Protocols in Bioinformatics || Using the Tools and Resources of the RCSB Protein Data Bank

Baxevanis, Andreas D., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 1.68 MB

english, 2002

8

Current Protocols in Bioinformatics || Using RepeatMasker to Identify Repetitive Elements in Genomic Sequences

Baxevanis, Andreas D., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 665 KB

english, 2002

9

Current Protocols in Bioinformatics || Using MODELTEST and PAUP* to Select a Model of Nucleotide Substitution

Baxevanis, Andreas D., Davison, Daniel B., Page, Roderic D.M., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 441 KB

english, 2002

10

Current Protocols in Bioinformatics || Searching Online Mendelian Inheritance in Man (OMIM) for Information on Genetic Loci Involved in Human Disease

Baxevanis, Andreas D., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 535 KB

english, 2002

11

Current Protocols in Bioinformatics || Searching NCBI's dbSNP Database

Baxevanis, Andreas D., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 1.93 MB

english, 2002

12

Current Protocols in Bioinformatics || Multiple Sequence Alignment Using ClustalW and ClustalX

Baxevanis, Andreas D., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 911 KB

english, 2002

13

Current Protocols in Bioinformatics || Using Dali for Structural Comparison of Proteins

Baxevanis, Andreas D., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 1.58 MB

english, 2002

14

Current Protocols in Bioinformatics || Sequence File Format Conversion with Command-Line Readseq

Baxevanis, Andreas D., Davison, Daniel B., Page, Roderic D.M., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 77 KB

english, 2002

15

Current Protocols in Bioinformatics || An Introduction to Sequence Similarity (“Homology”) Searching

Baxevanis, Andreas D., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 177 KB

english, 2002

16

Current Protocols in Bioinformatics || Using VMD: An Introductory Tutorial

Baxevanis, Andreas D., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 1.28 MB

english, 2002

17

Current Protocols in Bioinformatics || Proteomics and the Analysis of Proteomic Data: An Overview of Current Protein-Profiling Technologies

Baxevanis, Andreas D., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 249 KB

english, 2002

18

Current Protocols in Bioinformatics || Using GenePattern for Gene Expression Analysis

Baxevanis, Andreas D., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 1.12 MB

english, 2002

19

Current Protocols in Bioinformatics || Glossary of Bioinformatics Terms

Baxevanis, Andreas D., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 87 KB

english, 2002

20

Current Protocols in Bioinformatics || Using Pharmabase to Perform Pharmacological Analyses of Cell Function

Baxevanis, Andreas D., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 989 KB

english, 2002

21

Current Protocols in Bioinformatics || Using BiblioSpec for Creating and Searching Tandem MS Peptide Libraries

Baxevanis, Andreas D., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 1.08 MB

english, 2002

22

Extreme mitochondrial evolution in the ctenophore Mnemiopsis leidyi : Insight from mtDNA and the nuclear genome

Pett, Walker, Ryan, Joseph F., Pang, Kevin, Mullikin, James C., Martindale, Mark Q., Baxevanis, Andreas D., Lavrov, Dennis V.

Journal:

Mitochondrial DNA

Year:

2011

Language:

english

File:

PDF, 423 KB

english, 2011

23

Current Protocols in Bioinformatics || Visualizing Phylogenetic Trees Using TreeView

Baxevanis, Andreas D., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 267 KB

english, 2002

24

Current Protocols in Bioinformatics || An Overview of Gene Identification: Approaches, Strategies, and Considerations

Baxevanis, Andreas D., Davison, Daniel B., Page, Roderic D.M., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 156 KB

english, 2002

25

Current Protocols in Bioinformatics || Using geneid to Identify Genes

Baxevanis, Andreas D., Davison, Daniel B., Page, Roderic D.M., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 1.06 MB

english, 2002

26

Current Protocols in Bioinformatics || Using the Tools and Resources of the RCSB Protein Data Bank

Baxevanis, Andreas D., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 1.33 MB

english, 2002

27

Current Protocols in Bioinformatics || Installation and Use of the Computational Proteomics Analysis System (CPAS)

Baxevanis, Andreas D., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 2.88 MB

english, 2002

28

The maternal-zygotic transition and zygotic activation of the Mnemiopsis leidyi genome occurs within the first three cleavage cycles

Davidson, Phillip L, Koch, Bernard J., Schnitzler, Christine E., Henry, Jonathan Q., Martindale, Mark Q., Baxevanis, Andreas D., Browne, William E.

Journal:

Molecular Reproduction and Development

Year:

2017

Language:

english

File:

PDF, 843 KB

english, 2017

29

Threading analysis of the Pitx2 homeodomain: Predicted structural effects of mutations causing Rieger syndrome and iridogoniodysgenesis

Sharmila Banerjee-Basu, Andreas D. Baxevanis

Journal:

Year:

1999

Language:

english

File:

PDF, 782 KB

english, 1999

30

Gaucher mutation N188S is associated with myoclonic epilepsy

Laurence Kowarz, Ozlem Goker-Alpan, Sharmila Banerjee-Basu, Mary E. LaMarca, Leah Kinlaw, Raphael Schiffmann, Andreas D. Baxevanis, Ellen Sidransky

Journal:

Year:

2005

Language:

english

File:

PDF, 91 KB

english, 2005

31

The biologist and the World Wide Web

Andreas D Baxevanis, Wojciech Makalowski, BF Francis Ouellette, Hervé Récipon

Journal:

Current Opinion in Biotechnology

Year:

1996

Language:

english

File:

PDF, 216 KB

english, 1996

32

Structural analysis of disease-causing mutations in the P-subfamily of forkhead transcription factors

Sharmila Banerjee-Basu, Andreas D. Baxevanis

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2004

Language:

english

File:

PDF, 540 KB

english, 2004

33

The histone database: A comprehensive resource for histones and histone fold-containing proteins

Leonardo Mariño-Ramírez, Benjamin Hsu, Andreas D. Baxevanis, David Landsman

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2006

Language:

english

File:

PDF, 415 KB

english, 2006

34

Comparative analyses of theDominant megacolon-SOX10genomic interval in mouse and human

E. Michelle Southard-Smith, John E. Collins, Jane S. Ellison, Kimberly J. Smith, Andreas D. Baxevanis, Jeffrey W. Touchman, Eric D. Green, Ian Dunham, William J. Pavan

Journal:

Mammalian Genome

Year:

1999

Language:

english

File:

PDF, 803 KB

english, 1999

35

10.1038/71643

Collins, Francis S., Lipkin, Steven M., Wang, Victoria, Jacoby, Russell, Banerjee-Basu, Sharmila, Baxevanis, Andreas D., Lynch, Henry T., Elliott, Rosemary M.

Journal:

Nature Genetics

Year:

2000

Language:

english

File:

PDF, 1.06 MB

english, 2000

36

10.1038/75637

Biesecker, Leslie G., Stone, Deborah L., Slavotinek, Anne, Bouffard, Gerard G., Banerjee-Basu, Sharmila, Baxevanis, Andreas D., Barr, Mason

Journal:

Nature Genetics

Year:

2000

Language:

english

File:

PDF, 298 KB

english, 2000

37

An integrated approach to the extraction, storage, processing and analysis of microarray gene expression data

Baxevanis, Andreas D., Makalowska, Izabela, Trout, Kenneth, Zhou, Qien, Zhou, Zheng-Zheng, Stein, Jaime, Dougherty, Edward R., Meltzer, Paul S., Chen, Yidong, Bittner, Michael L.

Journal:

Nature Genetics

Year:

2001

Language:

english

File:

PDF, 29 KB

english, 2001

38

Putting science over supposition in the arena of personalized genomics

McBride, Colleen M, Alford, Sharon Hensley, Reid, Robert J, Larson, Eric B, Baxevanis, Andreas D, Brody, Lawrence C

Journal:

Nature Genetics

Year:

2008

Language:

english

File:

PDF, 195 KB

english, 2008

39

Chipping away at genomic medicine

Trent, Jeffrey M., Baxevanis, Andreas D.

Journal:

Nature Genetics

Year:

2002

Language:

english

File:

PDF, 36 KB

english, 2002

40

A user's guide to the human genome

Wolfsberg, Tyra G., Wetterstrand, Kris A., Guyer, Mark S., Collins, Francis S., Baxevanis, Andreas D.

Journal:

Nature Genetics

Year:

2003

Language:

english

File:

PDF, 33 KB

english, 2003

41

Power to the people

Baxevanis, Andreas D., Collins, Francis S.

Journal:

Nature Genetics

Year:

2003

Language:

english

File:

PDF, 31 KB

english, 2003

42

Pendred syndrome is caused by mutations in a putative sulphate transporter gene (PDS)

Everett, Lorraine A., Glaser, Benjamin, Beck, John C., Idol, Jacquelyn R., Buchs, Andreas, Heyman, Ma'ayan, Adawi, Faiad, Hazani, Elizur, Nassir, Elias, Baxevanis, Andreas D.

Journal:

Nature Genetics

Year:

1997

File:

PDF, 2.05 MB

1997

43

A user's guide to the human genome

Wolfsberg, Tyra G., Wetterstrand, Kris A., Guyer, Mark S., Collins, Francis S., Baxevanis, Andreas D.

Journal:

Nature Genetics

Year:

2002

Language:

english

File:

PDF, 33 KB

english, 2002

44

Power to the people

Baxevanis, Andreas D., Collins, Francis S.

Journal:

Nature Genetics

Year:

2002

Language:

english

File:

PDF, 28 KB

english, 2002

45

Current Protocols in Bioinformatics Volume 559 || An Introduction to Hidden Markov Models

Baxevanis, Andreas D., Page, Roderic D.M., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 790 KB

english, 2002

46

Current Protocols in Bioinformatics Volume 114 || Biological Sequence Motif Discovery Using motif-x

Baxevanis, Andreas D., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 1.05 MB

english, 2002

47

Current Protocols in Bioinformatics Volume 114 || Using the Generic Genome Browser (GBrowse)

Baxevanis, Andreas D., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 699 KB

english, 2002

48

Current Protocols in Bioinformatics Volume 114 || Searching NCBI Databases Using Entrez

Baxevanis, Andreas D., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 1.53 MB

english, 2002

49

Current Protocols in Bioinformatics Volume 75 || RNA Secondary Structure Analysis Using RNAstructure

Baxevanis, Andreas D., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 591 KB

english, 2002

50

Current Protocols in Bioinformatics Volume 658 || Finding Protein Sequences Using PROWL

Baxevanis, Andreas D., Petsko, Gregory A., Stein, Lincoln D., Stormo, Gary D.

Year:

2002

Language:

english

File:

PDF, 845 KB

english, 2002